Also speaking of trains, I can't zoom out and look at intercity train lines. I can only see highways. If I'm in Japan without a car, planning a sightseeing trip and wondering where I can easily visit by train, I can't do that with Google maps. The highways obscure everything and can't be turned off.
Well, in my opinion Google Maps is terrible as an actual map anyway, it's more like some vaguely map-shaped thing that serves as a convenient geographical background for displaying POIs and directions on, but no so much use for actually orienting yourself or getting a feel for the geography of a place.
And +1 to the lack of railway lines when zoomed out, indeed another annoyance along the above lines.